Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 AC092850.2-201ENST00000623821 2697 ntBASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
R3HCC1Q9Y3T6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 PCDHA14-201ENST00000506751 2298 ntBASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 TERF1P1-201ENST00000311003 1181 ntBASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 MIR3180-5-201ENST00000583743 153 ntBASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 AC092865.7-201ENST00000641832 219 ntBASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.24■□□□□ 0.83
R3HCC1Q9Y3T6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 OR6D1P-203ENST00000641209 4860 ntBASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 AC140113.3-201ENST00000605663 199 ntBASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
R3HCC1Q9Y3T6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 AL109659.2-201ENST00000606809 1674 ntBASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 KRT8P45-201ENST00000414328 1447 ntBASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms