Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 AC096633.1-201ENST00000422446 749 ntBASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 AL845331.1-201ENST00000424978 1190 ntBASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 AC125634.1-201ENST00000438758 1403 ntBASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 DDX43P3-201ENST00000441064 443 ntBASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 NUS1P1-201ENST00000446295 882 ntBASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.81■□□□□ 0.12
PARPBPQ9NWS1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 NSUN5P1-202ENST00000421140 1535 ntBASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 NSUN5P2-203ENST00000457352 1529 ntBASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 IGHV3-47-201ENST00000425060 335 ntBASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 KRT18P56-201ENST00000507275 550 ntBASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 AL138831.2-201ENST00000606564 490 ntBASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PARPBPQ9NWS1 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PARPBPQ9NWS1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms