Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 AL592295.1-201ENST00000400984 884 ntBASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 AC026396.1-201ENST00000419388 421 ntBASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 AC008813.1-201ENST00000536597 885 ntBASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 CICP23-201ENST00000605013 2741 ntBASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
CDC42SE1Q9NRR8 CICP8-201ENST00000455800 2813 ntBASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 ZNRF2P1-201ENST00000441407 443 ntBASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 MED25-210ENST00000612854 801 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 MED25-214ENST00000622402 642 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC8.99□□□□□ -0.97
CDC42SE1Q9NRR8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms