Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.65■□□□□ 0.26
KLHL1Q9NR64 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL1Q9NR64 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL1Q9NR64 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL1Q9NR64 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL1Q9NR64 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL1Q9NR64 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
KLHL1Q9NR64 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
KLHL1Q9NR64 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 ESPNP-201ENST00000270691 2015 ntBASIC16.64■□□□□ 0.25
KLHL1Q9NR64 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 AP005901.3-202ENST00000581653 237 ntBASIC16.64■□□□□ 0.25
KLHL1Q9NR64 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.64■□□□□ 0.25
KLHL1Q9NR64 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 IGHV3-47-201ENST00000425060 335 ntBASIC16.63■□□□□ 0.25
KLHL1Q9NR64 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 AC008687.5-201ENST00000593746 558 ntBASIC16.63■□□□□ 0.25
KLHL1Q9NR64 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KLHL1Q9NR64 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 TSPY12P-201ENST00000421279 868 ntBASIC16.62■□□□□ 0.25
KLHL1Q9NR64 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KLHL1Q9NR64 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms