Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 AC098934.4-201ENST00000564127 592 ntBASIC20.87■□□□□ 0.93
RTN4Q9NQC3 SOX15-203ENST00000570788 1093 ntBASIC20.87■□□□□ 0.93
RTN4Q9NQC3 AC008687.6-201ENST00000596318 630 ntBASIC20.87■□□□□ 0.93
RTN4Q9NQC3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN4Q9NQC3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 PPP1R26P4-201ENST00000619065 3527 ntBASIC20.85■□□□□ 0.93
RTN4Q9NQC3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.85■□□□□ 0.93
RTN4Q9NQC3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.85■□□□□ 0.93
RTN4Q9NQC3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN4Q9NQC3 AC063926.3-201ENST00000624734 5658 ntBASIC20.84■□□□□ 0.93
RTN4Q9NQC3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.84■□□□□ 0.93
RTN4Q9NQC3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms