Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NELFAQ9H3P2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NELFAQ9H3P2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NELFAQ9H3P2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NELFAQ9H3P2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.76■□□□□ 0.11
NELFAQ9H3P2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
NELFAQ9H3P2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 AC112698.1-201ENST00000510299 916 ntBASIC15.75■□□□□ 0.11
NELFAQ9H3P2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NELFAQ9H3P2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 MTCL1P1-201ENST00000446207 792 ntBASIC15.74■□□□□ 0.11
NELFAQ9H3P2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 AP005901.3-202ENST00000581653 237 ntBASIC15.74■□□□□ 0.11
NELFAQ9H3P2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.74■□□□□ 0.11
NELFAQ9H3P2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 LINC00896-202ENST00000609602 2128 ntBASIC15.74■□□□□ 0.11
NELFAQ9H3P2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 KRT8P47-201ENST00000604727 1398 ntBASIC15.74■□□□□ 0.11
NELFAQ9H3P2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NELFAQ9H3P2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 FER1L4-210ENST00000615531 5998 ntBASIC15.73■□□□□ 0.11
NELFAQ9H3P2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NELFAQ9H3P2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms