Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATXN3LQ9H3M9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ATXN3LQ9H3M9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
ATXN3LQ9H3M9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATXN3LQ9H3M9 AC079776.2-201ENST00000641154 1609 ntBASIC18.52■□□□□ 0.55
ATXN3LQ9H3M9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.52■□□□□ 0.55
ATXN3LQ9H3M9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATXN3LQ9H3M9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATXN3LQ9H3M9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 AC103564.2-201ENST00000432853 1299 ntBASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 AC105339.3-201ENST00000560043 636 ntBASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 AC145285.3-201ENST00000564603 959 ntBASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 AD001527.2-201ENST00000622994 785 ntBASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 AL022326.1-202ENST00000641533 845 ntBASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATXN3LQ9H3M9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 AL133373.2-201ENST00000623187 2828 ntBASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 AC090340.1-201ENST00000620778 4980 ntBASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 COX5BP2-201ENST00000392354 334 ntBASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 AC004817.3-201ENST00000602957 2129 ntBASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATXN3LQ9H3M9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 LAGE3P1-201ENST00000425356 484 ntBASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 RNA5SP415-201ENST00000517246 115 ntBASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 AP002414.3-201ENST00000589352 1468 ntBASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 SIRPAP1-201ENST00000448467 1770 ntBASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATXN3LQ9H3M9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms