Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 LARP1B-207ENST00000507377 1593 ntTSL 28.96□□□□□ -0.977e-7■■□□□ 13.1
CSTF2TQ9H0L4 LARP1B-209ENST00000508819 1891 ntTSL 56.85□□□□□ -1.311e-7■■□□□ 13.1
CSTF2TQ9H0L4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.351e-7■■□□□ 13.1
CSTF2TQ9H0L4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.13e-6■■□□□ 13.1
CSTF2TQ9H0L4 SCAP-202ENST00000320017 3430 ntTSL 214.66□□□□□ -0.063e-6■■□□□ 13.1
CSTF2TQ9H0L4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.17□□□□□ -0.143e-6■■□□□ 13.1
CSTF2TQ9H0L4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.75□□□□□ -0.213e-6■■□□□ 13.1
CSTF2TQ9H0L4 SCAP-207ENST00000441517 3748 ntTSL 213.73□□□□□ -0.213e-6■■□□□ 13.1
CSTF2TQ9H0L4 SRCIN1-218ENST00000622519 5204 ntTSL 215.63■□□□□ 0.092e-6■■□□□ 13.1
CSTF2TQ9H0L4 SRCIN1-217ENST00000622190 4635 ntTSL 214.44□□□□□ -0.12e-6■■□□□ 13.1
CSTF2TQ9H0L4 ABO-201ENST00000453660 6341 ntTSL 1 (best)13.04□□□□□ -0.322e-7■■□□□ 13.1
CSTF2TQ9H0L4 RAPGEFL1-211ENST00000613811 1744 ntTSL 1 (best)27.82■■■□□ 2.049e-7■■□□□ 13.1
CSTF2TQ9H0L4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.32■□□□□ 0.049e-7■■□□□ 13.1
CSTF2TQ9H0L4 RAPGEFL1-208ENST00000543876 560 ntTSL 413.75□□□□□ -0.219e-7■■□□□ 13.1
CSTF2TQ9H0L4 RAPGEFL1-205ENST00000538884 540 ntTSL 412.61□□□□□ -0.399e-7■■□□□ 13.1
CSTF2TQ9H0L4 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC12.18□□□□□ -0.469e-7■■□□□ 13.1
CSTF2TQ9H0L4 RAPGEFL1-201ENST00000264644 3429 ntTSL 5 BASIC9.61□□□□□ -0.879e-7■■□□□ 13.1
CSTF2TQ9H0L4 USP7-208ENST00000563961 4533 ntTSL 513.19□□□□□ -0.34e-8■■□□□ 13.1
CSTF2TQ9H0L4 MALAT1-216ENST00000620465 333 ntTSL 25.48□□□□□ -1.531e-323■■□□□ 13.1
CSTF2TQ9H0L4 ANKRD17-210ENST00000561029 2717 ntTSL 520.68■□□□□ 0.99e-12■■□□□ 13.1
CSTF2TQ9H0L4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.249e-12■■□□□ 13.1
CSTF2TQ9H0L4 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.489e-12■■□□□ 13.1
CSTF2TQ9H0L4 ANKRD17-207ENST00000558247 8456 ntAPPRIS ALT2 TSL 1 (best)6.18□□□□□ -1.429e-12■■□□□ 13.1
CSTF2TQ9H0L4 MIR638-201ENST00000385237 100 ntBASIC21.32■■□□□ 12e-10■■□□□ 13.1
CSTF2TQ9H0L4 SH3PXD2A-204ENST00000420222 3251 ntTSL 214.15□□□□□ -0.145e-7■■□□□ 13.1
CSTF2TQ9H0L4 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.375e-7■■□□□ 13.1
CSTF2TQ9H0L4 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)12.23□□□□□ -0.455e-7■■□□□ 13.1
CSTF2TQ9H0L4 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.065e-7■■□□□ 13.1
CSTF2TQ9H0L4 SCART1-201ENST00000462252 3451 ntTSL 215.09■□□□□ 0.016e-7■■□□□ 13.1
CSTF2TQ9H0L4 CYBA-204ENST00000563526 1052 ntTSL 214.63□□□□□ -0.076e-10■■□□□ 13.1
CSTF2TQ9H0L4 CYBA-209ENST00000568278 439 ntTSL 512.26□□□□□ -0.456e-10■■□□□ 13.1
CSTF2TQ9H0L4 SLC38A2-210ENST00000551405 526 ntTSL 415.74■□□□□ 0.111e-25■■□□□ 13.1
CSTF2TQ9H0L4 SLC38A2-213ENST00000553252 846 ntTSL 215.72■□□□□ 0.111e-25■■□□□ 13.1
CSTF2TQ9H0L4 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -11e-25■■□□□ 13.1
CSTF2TQ9H0L4 SLC38A2-208ENST00000549258 4384 ntTSL 23.96□□□□□ -1.771e-25■■□□□ 13.1
CSTF2TQ9H0L4 SYNJ2-203ENST00000367113 939 ntTSL 27.39□□□□□ -1.231e-6■■□□□ 13.1
CSTF2TQ9H0L4 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.572e-8■■□□□ 13.1
CSTF2TQ9H0L4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.24■□□□□ 0.194e-8■■□□□ 13.1
CSTF2TQ9H0L4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.284e-8■■□□□ 13.1
CSTF2TQ9H0L4 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.354e-8■■□□□ 13.1
CSTF2TQ9H0L4 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.09□□□□□ -0.474e-8■■□□□ 13.1
CSTF2TQ9H0L4 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC12□□□□□ -0.494e-8■■□□□ 13.1
CSTF2TQ9H0L4 GDPD5-206ENST00000527820 3211 ntTSL 1 (best)11.98□□□□□ -0.494e-8■■□□□ 13.1
CSTF2TQ9H0L4 GDPD5-205ENST00000527322 1000 ntTSL 1 (best)10.66□□□□□ -0.74e-8■■□□□ 13.1
CSTF2TQ9H0L4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.65□□□□□ -0.062e-7■■□□□ 13.1
CSTF2TQ9H0L4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.49□□□□□ -0.252e-7■■□□□ 13.1
CSTF2TQ9H0L4 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.371e-8■■□□□ 13.1
CSTF2TQ9H0L4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.94□□□□□ -1.461e-8■■□□□ 13.1
CSTF2TQ9H0L4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.031e-6■■□□□ 13.1
CSTF2TQ9H0L4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.11e-6■■□□□ 13.1
CSTF2TQ9H0L4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.21e-6■■□□□ 13.1
CSTF2TQ9H0L4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.231e-6■■□□□ 13.1
CSTF2TQ9H0L4 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.961e-6■■□□□ 13.1
CSTF2TQ9H0L4 NPAS2-202ENST00000427413 625 ntTSL 36.94□□□□□ -1.31e-9■■□□□ 13.1
CSTF2TQ9H0L4 ARIH1-206ENST00000564062 612 ntTSL 329.61■■■□□ 2.335e-8■■□□□ 13.1
CSTF2TQ9H0L4 ARIH1-210ENST00000570085 807 ntTSL 327.48■■□□□ 1.995e-8■■□□□ 13.1
CSTF2TQ9H0L4 SGSM2-207ENST00000573062 1335 ntTSL 226.93■■□□□ 1.95e-7■■□□□ 13.1
CSTF2TQ9H0L4 SGSM2-205ENST00000572875 460 ntTSL 322.52■■□□□ 1.25e-7■■□□□ 13.1
CSTF2TQ9H0L4 TBCD-222ENST00000576677 1926 ntTSL 1 (best)19.58■□□□□ 0.725e-7■■□□□ 13.1
CSTF2TQ9H0L4 CD99-208ENST00000482405 842 ntTSL 219.44■□□□□ 0.75e-7■■□□□ 13.1
CSTF2TQ9H0L4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.75e-7■■□□□ 13.1
CSTF2TQ9H0L4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.615e-7■■□□□ 13.1
CSTF2TQ9H0L4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.615e-7■■□□□ 13.1
CSTF2TQ9H0L4 CD99-206ENST00000449611 604 ntAPPRIS ALT2 TSL 517.13■□□□□ 0.335e-7■■□□□ 13.1
CSTF2TQ9H0L4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.315e-7■■□□□ 13.1
CSTF2TQ9H0L4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.275e-7■■□□□ 13.1
CSTF2TQ9H0L4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.265e-7■■□□□ 13.1
CSTF2TQ9H0L4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.165e-7■■□□□ 13.1
CSTF2TQ9H0L4 CD99-211ENST00000623253 573 ntTSL 1 (best)15.46■□□□□ 0.075e-7■■□□□ 13.1
CSTF2TQ9H0L4 TBCD-212ENST00000573364 626 ntTSL 314.8□□□□□ -0.045e-7■■□□□ 13.1
CSTF2TQ9H0L4 TBCD-221ENST00000576603 765 ntTSL 314.38□□□□□ -0.115e-7■■□□□ 13.1
CSTF2TQ9H0L4 TBCD-218ENST00000575132 707 ntTSL 513.98□□□□□ -0.175e-7■■□□□ 13.1
CSTF2TQ9H0L4 TBCD-226ENST00000577051 979 ntTSL 513.38□□□□□ -0.275e-7■■□□□ 13.1
CSTF2TQ9H0L4 SGSM2-211ENST00000574563 3410 ntTSL 2 BASIC10.84□□□□□ -0.675e-7■■□□□ 13.1
CSTF2TQ9H0L4 A2M-211ENST00000543436 600 ntTSL 510.79□□□□□ -0.687e-13■■□□□ 13.1
CSTF2TQ9H0L4 AL136295.5-201ENST00000558468 4798 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.684e-10■■□□□ 13.1
CSTF2TQ9H0L4 ARIH1-209ENST00000567762 319 ntTSL 35.91□□□□□ -1.465e-8■■□□□ 13.1
CSTF2TQ9H0L4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.485e-8■■□□□ 13.1
CSTF2TQ9H0L4 MIR4635-201ENST00000583759 79 ntBASIC2.43□□□□□ -2.025e-7■■□□□ 13.1
CSTF2TQ9H0L4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.072e-7■■□□□ 13.1
CSTF2TQ9H0L4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.052e-9■■□□□ 13.1
CSTF2TQ9H0L4 RPRD1A-208ENST00000589050 1022 ntTSL 1 (best)14.26□□□□□ -0.133e-7■■□□□ 13.1
CSTF2TQ9H0L4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.41□□□□□ -0.262e-9■■□□□ 13.1
CSTF2TQ9H0L4 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC11.62□□□□□ -0.552e-9■■□□□ 13.1
CSTF2TQ9H0L4 KCTD7-207ENST00000639879 5098 ntTSL 4 BASIC10.57□□□□□ -0.722e-9■■□□□ 13.1
CSTF2TQ9H0L4 KCTD7-208ENST00000640234 1704 ntTSL 59.73□□□□□ -0.852e-9■■□□□ 13.1
CSTF2TQ9H0L4 KCTD7-211ENST00000640851 3745 ntTSL 5 BASIC9.69□□□□□ -0.862e-9■■□□□ 13.1
CSTF2TQ9H0L4 KCTD7-205ENST00000638540 4471 ntTSL 58.7□□□□□ -1.022e-9■■□□□ 13.1
CSTF2TQ9H0L4 KCTD7-204ENST00000638524 3747 ntTSL 58.62□□□□□ -1.032e-9■■□□□ 13.1
CSTF2TQ9H0L4 PCBP2-224ENST00000552980 527 ntTSL 35.05□□□□□ -1.62e-14■■□□□ 13.1
CSTF2TQ9H0L4 SPHK1-206ENST00000590379 588 ntTSL 319.61■□□□□ 0.731e-8■■□□□ 13.1
CSTF2TQ9H0L4 RAPGEFL1-207ENST00000541245 382 ntTSL 313.81□□□□□ -0.26e-10■■□□□ 13.1
CSTF2TQ9H0L4 SLC17A9-205ENST00000483113 1624 ntTSL 313.31□□□□□ -0.286e-10■■□□□ 13.1
CSTF2TQ9H0L4 SLCO4A1-207ENST00000495889 543 ntTSL 316.26■□□□□ 0.191e-6■■□□□ 13.1
CSTF2TQ9H0L4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.12e-9■■□□□ 13.1
CSTF2TQ9H0L4 EZH2-207ENST00000483012 1491 ntTSL 221.93■■□□□ 1.12e-9■■□□□ 13.1
CSTF2TQ9H0L4 EZH2-210ENST00000498186 1876 ntTSL 221.92■■□□□ 1.12e-9■■□□□ 13.1
CSTF2TQ9H0L4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.44■■□□□ 1.022e-9■■□□□ 13.1
CSTF2TQ9H0L4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.712e-9■■□□□ 13.1
CSTF2TQ9H0L4 EZH2-209ENST00000492143 3641 ntTSL 216.26■□□□□ 0.192e-9■■□□□ 13.1
Retrieved 100 of 19,151 protein–RNA pairs in 188.8 ms