Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 TSPY22P-201ENST00000427496 604 ntBASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 AC092647.4-201ENST00000457211 535 ntBASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO3Q9BXY4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 AC005915.1-201ENST00000624912 2018 ntBASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 RNF216P1-203ENST00000404404 2427 ntBASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 AP005901.3-202ENST00000581653 237 ntBASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 AL592071.1-201ENST00000611956 408 ntBASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 AC105020.1-201ENST00000435356 2205 ntBASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RSPO3Q9BXY4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 AL031133.1-201ENST00000406807 723 ntBASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 AC109462.3-201ENST00000573934 613 ntBASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 AC011498.5-201ENST00000592027 486 ntBASIC16.15■□□□□ 0.18
RSPO3Q9BXY4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms