Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.79■□□□□ 0.28
CGREF1Q99674 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.79■□□□□ 0.28
CGREF1Q99674 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
CGREF1Q99674 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.79■□□□□ 0.28
CGREF1Q99674 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CGREF1Q99674 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGREF1Q99674 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.79■□□□□ 0.28
CGREF1Q99674 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CGREF1Q99674 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CGREF1Q99674 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.78■□□□□ 0.28
CGREF1Q99674 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CGREF1Q99674 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.78■□□□□ 0.28
CGREF1Q99674 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
CGREF1Q99674 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CGREF1Q99674 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 MIR718-201ENST00000390190 70 ntBASIC16.78■□□□□ 0.28
CGREF1Q99674 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.78■□□□□ 0.28
CGREF1Q99674 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.78■□□□□ 0.28
CGREF1Q99674 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.78■□□□□ 0.28
CGREF1Q99674 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.78■□□□□ 0.28
CGREF1Q99674 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.78■□□□□ 0.28
CGREF1Q99674 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.78■□□□□ 0.28
CGREF1Q99674 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.78■□□□□ 0.28
CGREF1Q99674 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CGREF1Q99674 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CGREF1Q99674 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.78■□□□□ 0.28
CGREF1Q99674 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 LYSMD4-203ENST00000378904 2122 ntBASIC16.78■□□□□ 0.28
CGREF1Q99674 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGREF1Q99674 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.78■□□□□ 0.28
CGREF1Q99674 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CGREF1Q99674 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CGREF1Q99674 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
CGREF1Q99674 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CGREF1Q99674 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.77■□□□□ 0.28
CGREF1Q99674 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.77■□□□□ 0.28
CGREF1Q99674 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.77■□□□□ 0.28
CGREF1Q99674 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.77■□□□□ 0.28
CGREF1Q99674 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.77■□□□□ 0.28
CGREF1Q99674 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.77■□□□□ 0.28
CGREF1Q99674 AC008550.1-201ENST00000511500 884 ntBASIC16.77■□□□□ 0.28
CGREF1Q99674 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CGREF1Q99674 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.77■□□□□ 0.28
CGREF1Q99674 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGREF1Q99674 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CGREF1Q99674 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CGREF1Q99674 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGREF1Q99674 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGREF1Q99674 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGREF1Q99674 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGREF1Q99674 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGREF1Q99674 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGREF1Q99674 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGREF1Q99674 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGREF1Q99674 AGGF1P2-201ENST00000426656 2106 ntBASIC16.76■□□□□ 0.27
CGREF1Q99674 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CGREF1Q99674 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGREF1Q99674 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CGREF1Q99674 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGREF1Q99674 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CGREF1Q99674 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.76■□□□□ 0.27
CGREF1Q99674 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CGREF1Q99674 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CGREF1Q99674 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CGREF1Q99674 KRT89P-201ENST00000620027 1478 ntBASIC16.76■□□□□ 0.27
CGREF1Q99674 AC060834.1-201ENST00000443027 2032 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms