Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 GNAS-203ENST00000306120 1878 ntBASIC14.79□□□□□ -0.04
CCL13Q99616 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCL13Q99616 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL13Q99616 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL13Q99616 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 RCN1P2-201ENST00000398357 915 ntBASIC14.79□□□□□ -0.04
CCL13Q99616 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL13Q99616 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL13Q99616 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.79□□□□□ -0.04
CCL13Q99616 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL13Q99616 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.79□□□□□ -0.04
CCL13Q99616 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.79□□□□□ -0.04
CCL13Q99616 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL13Q99616 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.79□□□□□ -0.04
CCL13Q99616 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCL13Q99616 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL13Q99616 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL13Q99616 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.79□□□□□ -0.04
CCL13Q99616 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL13Q99616 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CCL13Q99616 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL13Q99616 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.79□□□□□ -0.04
CCL13Q99616 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL13Q99616 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.79□□□□□ -0.04
CCL13Q99616 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCL13Q99616 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCL13Q99616 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL13Q99616 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCL13Q99616 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL13Q99616 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL13Q99616 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL13Q99616 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 COX5BP2-201ENST00000392354 334 ntBASIC14.78□□□□□ -0.04
CCL13Q99616 FAM220CP-201ENST00000395253 831 ntBASIC14.78□□□□□ -0.04
CCL13Q99616 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 POM121L3P-201ENST00000419331 1163 ntBASIC14.78□□□□□ -0.04
CCL13Q99616 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL13Q99616 NUS1P1-201ENST00000446295 882 ntBASIC14.78□□□□□ -0.04
CCL13Q99616 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL13Q99616 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL13Q99616 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCL13Q99616 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL13Q99616 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL13Q99616 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCL13Q99616 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL13Q99616 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
CCL13Q99616 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCL13Q99616 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CCL13Q99616 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL13Q99616 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL13Q99616 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL13Q99616 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL13Q99616 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
CCL13Q99616 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.77□□□□□ -0.04
CCL13Q99616 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
CCL13Q99616 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL13Q99616 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL13Q99616 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCL13Q99616 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.77□□□□□ -0.04
CCL13Q99616 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms