Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 AC002558.1-201ENST00000488906 803 ntBASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 AC011840.4-201ENST00000578471 627 ntBASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB18PQ96TA0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 PCED1CP-201ENST00000419887 785 ntBASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 CHCHD2P8-201ENST00000429873 447 ntBASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 AP002383.4-201ENST00000442518 975 ntBASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 BX276092.5-203ENST00000456199 560 ntBASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 AL121672.3-201ENST00000608644 468 ntBASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB18PQ96TA0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 AC109462.3-201ENST00000573934 613 ntBASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 AL049757.1-201ENST00000616842 1596 ntBASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB18PQ96TA0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 SLC25A1P3-201ENST00000395415 828 ntBASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 AC087388.1-201ENST00000571370 1112 ntBASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 AL590326.2-201ENST00000625139 305 ntBASIC18.66■□□□□ 0.58
PCDHB18PQ96TA0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms