Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 IGHV3-47-201ENST00000425060 335 ntBASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 AC011467.2-201ENST00000598425 242 ntBASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 AL139327.4-201ENST00000612362 153 ntBASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CSPG4P5Q96PW8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 AL049757.1-201ENST00000616842 1596 ntBASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 AL023806.1-201ENST00000603994 1649 ntBASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 AC109462.3-201ENST00000573934 613 ntBASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 BNIP3P18-201ENST00000593976 575 ntBASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 TP73-AS1-210ENST00000637775 1455 ntBASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSPG4P5Q96PW8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 MINOS1P3-201ENST00000457048 203 ntBASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 AP000867.3-201ENST00000524675 377 ntBASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 AC074051.2-201ENST00000565115 352 ntBASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 AC093458.2-201ENST00000623150 629 ntBASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CSPG4P5Q96PW8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSPG4P5Q96PW8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSPG4P5Q96PW8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CSPG4P5Q96PW8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSPG4P5Q96PW8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms