Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GAFA1Q96PS6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 KRT8P10-201ENST00000450021 1447 ntBASIC14.66□□□□□ -0.06
GAFA1Q96PS6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 TSPY19P-201ENST00000418461 509 ntBASIC14.66□□□□□ -0.06
GAFA1Q96PS6 TSPY18P-201ENST00000441642 509 ntBASIC14.66□□□□□ -0.06
GAFA1Q96PS6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 KRT18P31-201ENST00000506277 1292 ntBASIC14.66□□□□□ -0.06
GAFA1Q96PS6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 AC111152.3-201ENST00000569699 673 ntBASIC14.66□□□□□ -0.06
GAFA1Q96PS6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 AL732292.2-201ENST00000609649 430 ntBASIC14.66□□□□□ -0.06
GAFA1Q96PS6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.66□□□□□ -0.06
GAFA1Q96PS6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 AL353593.2-201ENST00000602529 1483 ntBASIC14.65□□□□□ -0.06
GAFA1Q96PS6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 MYCLP1-201ENST00000372451 1075 ntBASIC14.65□□□□□ -0.06
GAFA1Q96PS6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 AD001527.2-201ENST00000622994 785 ntBASIC14.65□□□□□ -0.06
GAFA1Q96PS6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GAFA1Q96PS6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 AC091304.2-201ENST00000564639 760 ntBASIC14.64□□□□□ -0.07
GAFA1Q96PS6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms