Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.01■□□□□ 0.63
LRCH3Q96II8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 AL132655.2-201ENST00000596276 594 ntBASIC19.01■□□□□ 0.63
LRCH3Q96II8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCH3Q96II8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.01■□□□□ 0.63
LRCH3Q96II8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 AC006116.8-202ENST00000587620 1550 ntBASIC19.01■□□□□ 0.63
LRCH3Q96II8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LRCH3Q96II8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19■□□□□ 0.63
LRCH3Q96II8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 FEM1AP3-201ENST00000403722 1741 ntBASIC19■□□□□ 0.63
LRCH3Q96II8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19■□□□□ 0.63
LRCH3Q96II8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19■□□□□ 0.63
LRCH3Q96II8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19■□□□□ 0.63
LRCH3Q96II8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19■□□□□ 0.63
LRCH3Q96II8 GATB-205ENST00000508611 605 ntTSL 2 BASIC19■□□□□ 0.63
LRCH3Q96II8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19■□□□□ 0.63
LRCH3Q96II8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19■□□□□ 0.63
LRCH3Q96II8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19■□□□□ 0.63
LRCH3Q96II8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 AC009102.3-201ENST00000623118 1491 ntBASIC19■□□□□ 0.63
LRCH3Q96II8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LRCH3Q96II8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LRCH3Q96II8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19■□□□□ 0.63
LRCH3Q96II8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19■□□□□ 0.63
LRCH3Q96II8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19■□□□□ 0.63
LRCH3Q96II8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19■□□□□ 0.63
LRCH3Q96II8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LRCH3Q96II8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCH3Q96II8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
LRCH3Q96II8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 KRT18P65-201ENST00000439811 1286 ntBASIC18.99■□□□□ 0.63
LRCH3Q96II8 DDX43P3-201ENST00000441064 443 ntBASIC18.99■□□□□ 0.63
LRCH3Q96II8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 AC010336.2-201ENST00000564226 506 ntBASIC18.99■□□□□ 0.63
LRCH3Q96II8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.99■□□□□ 0.63
LRCH3Q96II8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCH3Q96II8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.98■□□□□ 0.63
LRCH3Q96II8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRCH3Q96II8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms