Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP6Q96FZ7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 AL023284.2-201ENST00000405850 579 ntBASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 MCCD1P1-208ENST00000445732 328 ntBASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 ITM2C-210ENST00000620962 501 ntBASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 AC006449.5-201ENST00000610658 2098 ntBASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP6Q96FZ7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 NIFKP9-201ENST00000419265 221 ntBASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 CR392000.1-201ENST00000624770 1228 ntBASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CHMP6Q96FZ7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 AL356309.3-201ENST00000624132 1934 ntBASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 AL353807.1-201ENST00000427475 662 ntBASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 AC004980.1-204ENST00000429707 299 ntBASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 AL158047.1-201ENST00000445918 881 ntBASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 RPS2P4-201ENST00000476944 856 ntBASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHMP6Q96FZ7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms