Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 AL590627.1-203ENST00000421194 1026 ntBASIC18.6■□□□□ 0.57
ATP2A3Q93084 KRT18P67-201ENST00000432816 1264 ntBASIC18.6■□□□□ 0.57
ATP2A3Q93084 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 ESPNP-201ENST00000270691 2015 ntBASIC18.6■□□□□ 0.57
ATP2A3Q93084 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A3Q93084 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2A3Q93084 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 AC135776.1-201ENST00000319817 2481 ntBASIC18.59■□□□□ 0.57
ATP2A3Q93084 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 KRT18P65-201ENST00000439811 1286 ntBASIC18.59■□□□□ 0.57
ATP2A3Q93084 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2A3Q93084 LINC01126-201ENST00000623515 1646 ntBASIC18.59■□□□□ 0.57
ATP2A3Q93084 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A3Q93084 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
ATP2A3Q93084 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A3Q93084 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A3Q93084 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A3Q93084 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A3Q93084 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ATP2A3Q93084 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.58■□□□□ 0.57
ATP2A3Q93084 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 RBM17P3-201ENST00000417687 1192 ntBASIC18.58■□□□□ 0.56
ATP2A3Q93084 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 AL138831.2-201ENST00000606564 490 ntBASIC18.58■□□□□ 0.56
ATP2A3Q93084 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP2A3Q93084 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A3Q93084 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ATP2A3Q93084 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP2A3Q93084 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A3Q93084 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP2A3Q93084 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms