Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 MYCLP1-201ENST00000372451 1075 ntBASIC18.8■□□□□ 0.6
SHC3Q92529 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.8■□□□□ 0.6
SHC3Q92529 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHC3Q92529 MIR1224-201ENST00000408193 85 ntBASIC18.8■□□□□ 0.6
SHC3Q92529 IGHV3-47-201ENST00000425060 335 ntBASIC18.8■□□□□ 0.6
SHC3Q92529 KRT17P6-201ENST00000453795 1220 ntBASIC18.8■□□□□ 0.6
SHC3Q92529 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SHC3Q92529 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHC3Q92529 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHC3Q92529 Z69720.1-201ENST00000601483 472 ntBASIC18.8■□□□□ 0.6
SHC3Q92529 AC069148.1-201ENST00000608741 768 ntBASIC18.8■□□□□ 0.6
SHC3Q92529 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.8■□□□□ 0.6
SHC3Q92529 AP001094.4-201ENST00000579008 2176 ntBASIC18.8■□□□□ 0.6
SHC3Q92529 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC3Q92529 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC3Q92529 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC3Q92529 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC3Q92529 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.8■□□□□ 0.6
SHC3Q92529 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.8■□□□□ 0.6
SHC3Q92529 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC3Q92529 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHC3Q92529 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHC3Q92529 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.79■□□□□ 0.6
SHC3Q92529 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 ARMC10P1-201ENST00000313754 855 ntBASIC18.79■□□□□ 0.6
SHC3Q92529 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SHC3Q92529 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.79■□□□□ 0.6
SHC3Q92529 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.79■□□□□ 0.6
SHC3Q92529 IGHV3-52-201ENST00000519770 353 ntBASIC18.79■□□□□ 0.6
SHC3Q92529 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.79■□□□□ 0.6
SHC3Q92529 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.79■□□□□ 0.6
SHC3Q92529 BNIP3P18-201ENST00000593976 575 ntBASIC18.79■□□□□ 0.6
SHC3Q92529 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 KRT8P10-201ENST00000450021 1447 ntBASIC18.79■□□□□ 0.6
SHC3Q92529 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 NSUN5P1-202ENST00000421140 1535 ntBASIC18.79■□□□□ 0.6
SHC3Q92529 NSUN5P2-203ENST00000457352 1529 ntBASIC18.79■□□□□ 0.6
SHC3Q92529 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SHC3Q92529 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.79■□□□□ 0.6
SHC3Q92529 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHC3Q92529 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SHC3Q92529 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.78■□□□□ 0.6
SHC3Q92529 TP73-AS1-210ENST00000637775 1455 ntBASIC18.78■□□□□ 0.6
SHC3Q92529 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.78■□□□□ 0.6
SHC3Q92529 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHC3Q92529 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.78■□□□□ 0.6
SHC3Q92529 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 ATP5G2P1-201ENST00000433580 426 ntBASIC18.78■□□□□ 0.6
SHC3Q92529 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.78■□□□□ 0.6
SHC3Q92529 LINC00265-3P-201ENST00000447588 903 ntBASIC18.78■□□□□ 0.6
SHC3Q92529 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SHC3Q92529 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.78■□□□□ 0.6
SHC3Q92529 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHC3Q92529 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SHC3Q92529 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SHC3Q92529 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SHC3Q92529 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.78■□□□□ 0.6
SHC3Q92529 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SHC3Q92529 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHC3Q92529 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SHC3Q92529 AL353593.2-201ENST00000602529 1483 ntBASIC18.77■□□□□ 0.6
SHC3Q92529 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC3Q92529 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.77■□□□□ 0.6
SHC3Q92529 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHC3Q92529 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC3Q92529 AC116353.5-201ENST00000638148 1699 ntBASIC18.77■□□□□ 0.6
SHC3Q92529 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC3Q92529 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHC3Q92529 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.77■□□□□ 0.6
SHC3Q92529 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHC3Q92529 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.77■□□□□ 0.6
SHC3Q92529 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.77■□□□□ 0.6
SHC3Q92529 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.77■□□□□ 0.6
SHC3Q92529 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.77■□□□□ 0.6
SHC3Q92529 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.77■□□□□ 0.6
SHC3Q92529 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.77■□□□□ 0.6
SHC3Q92529 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.77■□□□□ 0.6
SHC3Q92529 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.77■□□□□ 0.6
SHC3Q92529 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHC3Q92529 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SHC3Q92529 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHC3Q92529 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SHC3Q92529 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SHC3Q92529 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
SHC3Q92529 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms