Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.81■□□□□ 0.6
HERVK_113Q902F9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113Q902F9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113Q902F9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.81■□□□□ 0.6
HERVK_113Q902F9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.81■□□□□ 0.6
HERVK_113Q902F9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113Q902F9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.81■□□□□ 0.6
HERVK_113Q902F9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113Q902F9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 BX276092.7-203ENST00000637198 1536 ntBASIC18.8■□□□□ 0.6
HERVK_113Q902F9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 AC005332.7-201ENST00000614046 2005 ntBASIC18.8■□□□□ 0.6
HERVK_113Q902F9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 MIR943-201ENST00000401286 94 ntBASIC18.8■□□□□ 0.6
HERVK_113Q902F9 ACTG1P4-201ENST00000425123 1122 ntBASIC18.8■□□□□ 0.6
HERVK_113Q902F9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 AC099522.2-201ENST00000607001 744 ntBASIC18.8■□□□□ 0.6
HERVK_113Q902F9 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 AP001059.3-201ENST00000619053 235 ntBASIC18.8■□□□□ 0.6
HERVK_113Q902F9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113Q902F9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 TUBB3P1-201ENST00000405796 1332 ntBASIC18.79■□□□□ 0.6
HERVK_113Q902F9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.79■□□□□ 0.6
HERVK_113Q902F9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 AL592309.1-201ENST00000443127 649 ntBASIC18.79■□□□□ 0.6
HERVK_113Q902F9 FAM207CP-201ENST00000443486 507 ntBASIC18.79■□□□□ 0.6
HERVK_113Q902F9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.79■□□□□ 0.6
HERVK_113Q902F9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113Q902F9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 KLF2P3-201ENST00000451977 1087 ntBASIC18.78■□□□□ 0.6
HERVK_113Q902F9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 AC116407.2-201ENST00000613639 860 ntBASIC18.78■□□□□ 0.6
HERVK_113Q902F9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.78■□□□□ 0.6
HERVK_113Q902F9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms