Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SH3RF2Q8TEC5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 AL353593.2-201ENST00000602529 1483 ntBASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 PRYP5-201ENST00000451909 266 ntBASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 AC034105.1-201ENST00000563488 319 ntBASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 Z83851.2-201ENST00000609564 659 ntBASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SH3RF2Q8TEC5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 AC067852.2-201ENST00000590513 2313 ntBASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SH3RF2Q8TEC5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 AC009949.1-201ENST00000623048 1830 ntBASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 AC027601.4-201ENST00000611259 610 ntBASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 AC068880.1-201ENST00000507289 2297 ntBASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 AC020763.4-201ENST00000623414 4170 ntBASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 AC132938.5-201ENST00000624980 1813 ntBASIC18.26■□□□□ 0.51
SH3RF2Q8TEC5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 AL020989.1-201ENST00000422979 469 ntBASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 UNC93B6-202ENST00000528242 690 ntBASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 AC092865.5-201ENST00000545435 363 ntBASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 AC140113.2-201ENST00000604370 208 ntBASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH3RF2Q8TEC5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms