Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LMO3Q8TAP4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.86■□□□□ 0.61
LMO3Q8TAP4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 MINOS1P3-201ENST00000457048 203 ntBASIC18.86■□□□□ 0.61
LMO3Q8TAP4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.86■□□□□ 0.61
LMO3Q8TAP4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 AC114341.1-201ENST00000618070 349 ntBASIC18.85■□□□□ 0.61
LMO3Q8TAP4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
LMO3Q8TAP4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 POM121L3P-201ENST00000419331 1163 ntBASIC18.84■□□□□ 0.61
LMO3Q8TAP4 AC104819.1-201ENST00000504587 486 ntBASIC18.84■□□□□ 0.61
LMO3Q8TAP4 AC096582.2-201ENST00000510860 516 ntBASIC18.84■□□□□ 0.61
LMO3Q8TAP4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.84■□□□□ 0.61
LMO3Q8TAP4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 PMPCAP1-201ENST00000508114 1576 ntBASIC18.84■□□□□ 0.61
LMO3Q8TAP4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LMO3Q8TAP4 AC046185.3-201ENST00000623228 1824 ntBASIC18.84■□□□□ 0.61
LMO3Q8TAP4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 AC022211.2-201ENST00000585075 2527 ntBASIC18.83■□□□□ 0.61
LMO3Q8TAP4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.83■□□□□ 0.61
LMO3Q8TAP4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms