Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BEST4Q8NFU0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.29■□□□□ 0.04
BEST4Q8NFU0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.29■□□□□ 0.04
BEST4Q8NFU0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.29■□□□□ 0.04
BEST4Q8NFU0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
BEST4Q8NFU0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.29■□□□□ 0.04
BEST4Q8NFU0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.29■□□□□ 0.04
BEST4Q8NFU0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BEST4Q8NFU0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.28■□□□□ 0.04
BEST4Q8NFU0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 MIR3180-5-201ENST00000583743 153 ntBASIC15.28■□□□□ 0.04
BEST4Q8NFU0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 AP000692.2-201ENST00000608391 879 ntBASIC15.28■□□□□ 0.04
BEST4Q8NFU0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.28■□□□□ 0.04
BEST4Q8NFU0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.27■□□□□ 0.04
BEST4Q8NFU0 AC073195.1-201ENST00000607241 877 ntBASIC15.27■□□□□ 0.04
BEST4Q8NFU0 AC133963.1-201ENST00000504166 1679 ntBASIC15.27■□□□□ 0.03
BEST4Q8NFU0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.27■□□□□ 0.03
BEST4Q8NFU0 FSCN1P1-201ENST00000568912 1481 ntBASIC15.27■□□□□ 0.03
BEST4Q8NFU0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BEST4Q8NFU0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BEST4Q8NFU0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms