Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 LINC00304-203ENST00000565008 1864 ntBASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DNAAF1Q8NEP3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 MMP23A-201ENST00000234610 1017 ntBASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 HMGA1P5-201ENST00000412453 271 ntBASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 AC010947.1-201ENST00000623454 693 ntBASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.55■□□□□ 0.08
DNAAF1Q8NEP3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 AC046158.3-201ENST00000624947 2558 ntBASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 AP000523.1-201ENST00000398242 1049 ntBASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 AC092865.7-201ENST00000641832 219 ntBASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DNAAF1Q8NEP3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms