Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RDH13Q8NBN7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 IGHV3-47-201ENST00000425060 335 ntBASIC19.32■□□□□ 0.68
RDH13Q8NBN7 HCG4P8-203ENST00000443049 980 ntBASIC19.32■□□□□ 0.68
RDH13Q8NBN7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 AC104819.1-201ENST00000504587 486 ntBASIC19.32■□□□□ 0.68
RDH13Q8NBN7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.32■□□□□ 0.68
RDH13Q8NBN7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 BX276092.7-203ENST00000637198 1536 ntBASIC19.31■□□□□ 0.68
RDH13Q8NBN7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RDH13Q8NBN7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 SIRPAP1-201ENST00000448467 1770 ntBASIC19.3■□□□□ 0.68
RDH13Q8NBN7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RDH13Q8NBN7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RDH13Q8NBN7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RDH13Q8NBN7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RDH13Q8NBN7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RDH13Q8NBN7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RDH13Q8NBN7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RDH13Q8NBN7 LINC00304-203ENST00000565008 1864 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms