Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 MFSD11-216ENST00000590393 1141 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 MIR7108-201ENST00000614319 87 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 AC011298.3-201ENST00000615796 283 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 MIR6724-1-201ENST00000616420 92 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 MIR6724-2-201ENST00000616483 92 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 MIR6724-4-201ENST00000617390 92 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 MIR6724-3-201ENST00000622482 92 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 AC092437.1-201ENST00000624794 1048 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 AC079781.5-202ENST00000641784 3743 ntBASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HIST3H2BBQ8N257 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 AL391807.1-203ENST00000604392 2365 ntBASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
HIST3H2BBQ8N257 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 AC023157.3-201ENST00000619086 2088 ntBASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST3H2BBQ8N257 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms