Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 AL358472.4-201ENST00000633140 710 ntBASIC17.05■□□□□ 0.32
KRT78Q8N1N4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 HLA-J-201ENST00000462773 1622 ntBASIC17.05■□□□□ 0.32
KRT78Q8N1N4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
KRT78Q8N1N4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT78Q8N1N4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 LINC00304-203ENST00000565008 1864 ntBASIC17.03■□□□□ 0.32
KRT78Q8N1N4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 Z69720.1-201ENST00000601483 472 ntBASIC17.03■□□□□ 0.32
KRT78Q8N1N4 AC069148.1-201ENST00000608741 768 ntBASIC17.03■□□□□ 0.32
KRT78Q8N1N4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT78Q8N1N4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT78Q8N1N4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms