Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 AC004877.2-201ENST00000623941 599 ntBASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEFF1Q8IYR6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 AC003669.1-201ENST00000334569 611 ntBASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 IGLL3P-201ENST00000412472 434 ntBASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 AL031432.2-201ENST00000566714 459 ntBASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 AL928711.1-201ENST00000570165 459 ntBASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 AC109462.3-201ENST00000573934 613 ntBASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEFF1Q8IYR6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 MRPL20P1-201ENST00000400819 433 ntBASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 AC010654.1-201ENST00000615722 808 ntBASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEFF1Q8IYR6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms