Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 AL355355.2-201ENST00000442321 338 ntBASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 AC116562.2-201ENST00000507042 360 ntBASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 CR769767.2-201ENST00000622735 460 ntBASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM42Q8IWZ5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 AC026471.5-201ENST00000615068 467 ntBASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 AC106886.4-201ENST00000623557 2502 ntBASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM42Q8IWZ5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 REXO1L11P-201ENST00000620964 1927 ntBASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 CICP6-201ENST00000457191 2729 ntBASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM42Q8IWZ5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms