Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC024243.1-201ENST00000609234 778 ntBASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 AC105020.1-201ENST00000435356 2205 ntBASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUDCD3Q8IVD9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 AC012618.2-201ENST00000428058 849 ntBASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 AC233702.5-201ENST00000584107 538 ntBASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 PCDHB19P-201ENST00000570871 2371 ntBASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 AC060834.1-201ENST00000443027 2032 ntBASIC17.54■□□□□ 0.4
NUDCD3Q8IVD9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 UNC93B2-201ENST00000285383 730 ntBASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NUDCD3Q8IVD9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.52■□□□□ 0.4
NUDCD3Q8IVD9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms