Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 AC024563.2-201ENST00000603282 481 ntBASIC19.18■□□□□ 0.66
CNGA4Q8IV77 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 AC105020.1-201ENST00000435356 2205 ntBASIC19.18■□□□□ 0.66
CNGA4Q8IV77 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNGA4Q8IV77 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 MIR718-201ENST00000390190 70 ntBASIC19.17■□□□□ 0.66
CNGA4Q8IV77 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.17■□□□□ 0.66
CNGA4Q8IV77 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 PCDHA14-201ENST00000506751 2298 ntBASIC19.16■□□□□ 0.66
CNGA4Q8IV77 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA4Q8IV77 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 UBALD1-205ENST00000590891 2641 ntBASIC19.15■□□□□ 0.66
CNGA4Q8IV77 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 AC009154.2-201ENST00000621177 724 ntBASIC19.15■□□□□ 0.66
CNGA4Q8IV77 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA4Q8IV77 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms