Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.64■□□□□ 0.73
TRIM50Q86XT4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM50Q86XT4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 AC073621.1-201ENST00000392730 636 ntBASIC19.63■□□□□ 0.73
TRIM50Q86XT4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 ELK2BP-201ENST00000415014 1224 ntBASIC19.63■□□□□ 0.73
TRIM50Q86XT4 AC007967.2-201ENST00000432613 625 ntBASIC19.63■□□□□ 0.73
TRIM50Q86XT4 AC009947.1-201ENST00000444350 727 ntBASIC19.63■□□□□ 0.73
TRIM50Q86XT4 PRYP5-201ENST00000451909 266 ntBASIC19.63■□□□□ 0.73
TRIM50Q86XT4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM50Q86XT4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 BX842568.4-201ENST00000421222 227 ntBASIC19.62■□□□□ 0.73
TRIM50Q86XT4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM50Q86XT4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 AC006557.2-201ENST00000592985 1240 ntBASIC19.61■□□□□ 0.73
TRIM50Q86XT4 AC116407.2-201ENST00000613639 860 ntBASIC19.61■□□□□ 0.73
TRIM50Q86XT4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM50Q86XT4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms