Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 MIR1233-1-201ENST00000408722 82 ntBASIC15.6■□□□□ 0.09
RTTNQ86VV8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTTNQ86VV8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.6■□□□□ 0.09
RTTNQ86VV8 FLJ13224-201ENST00000313737 1514 ntBASIC15.59■□□□□ 0.09
RTTNQ86VV8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 TSPY12P-201ENST00000421279 868 ntBASIC15.59■□□□□ 0.09
RTTNQ86VV8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 AP002469.2-201ENST00000531724 424 ntBASIC15.59■□□□□ 0.09
RTTNQ86VV8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 AC139713.2-201ENST00000641328 2723 ntBASIC15.59■□□□□ 0.09
RTTNQ86VV8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 MIR574-201ENST00000385209 96 ntBASIC15.59■□□□□ 0.09
RTTNQ86VV8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RTTNQ86VV8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTTNQ86VV8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTTNQ86VV8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
RTTNQ86VV8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTTNQ86VV8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RTTNQ86VV8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTTNQ86VV8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTTNQ86VV8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.58■□□□□ 0.09
RTTNQ86VV8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
RTTNQ86VV8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTTNQ86VV8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 TPSP2-201ENST00000561760 610 ntBASIC15.58■□□□□ 0.08
RTTNQ86VV8 AC011498.5-201ENST00000592027 486 ntBASIC15.58■□□□□ 0.08
RTTNQ86VV8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 AC092329.2-201ENST00000598402 547 ntBASIC15.58■□□□□ 0.08
RTTNQ86VV8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 LINC00304-203ENST00000565008 1864 ntBASIC15.58■□□□□ 0.08
RTTNQ86VV8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 DRAXINP1-201ENST00000437611 948 ntBASIC15.58■□□□□ 0.08
RTTNQ86VV8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTTNQ86VV8 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
RTTNQ86VV8 AC005336.2-201ENST00000593183 939 ntBASIC15.58■□□□□ 0.08
RTTNQ86VV8 AL353801.3-201ENST00000609898 542 ntBASIC15.58■□□□□ 0.08
RTTNQ86VV8 BX640515.1-201ENST00000617215 977 ntBASIC15.58■□□□□ 0.08
RTTNQ86VV8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTTNQ86VV8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTTNQ86VV8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.57■□□□□ 0.08
RTTNQ86VV8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms