Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC090616.6-201ENST00000582640 721 ntBASIC17.62■□□□□ 0.41
LDB1Q86U70 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.62■□□□□ 0.41
LDB1Q86U70 AC005336.2-201ENST00000593183 939 ntBASIC17.62■□□□□ 0.41
LDB1Q86U70 AL121672.3-201ENST00000608644 468 ntBASIC17.62■□□□□ 0.41
LDB1Q86U70 AC010331.1-201ENST00000611423 582 ntBASIC17.62■□□□□ 0.41
LDB1Q86U70 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LDB1Q86U70 AL358472.4-201ENST00000633140 710 ntBASIC17.62■□□□□ 0.41
LDB1Q86U70 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.62■□□□□ 0.41
LDB1Q86U70 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LDB1Q86U70 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LDB1Q86U70 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LDB1Q86U70 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LDB1Q86U70 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.62■□□□□ 0.41
LDB1Q86U70 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.62■□□□□ 0.41
LDB1Q86U70 BX276092.7-203ENST00000637198 1536 ntBASIC17.62■□□□□ 0.41
LDB1Q86U70 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.62■□□□□ 0.41
LDB1Q86U70 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LDB1Q86U70 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.61■□□□□ 0.41
LDB1Q86U70 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
LDB1Q86U70 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LDB1Q86U70 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 AC096633.1-201ENST00000422446 749 ntBASIC17.61■□□□□ 0.41
LDB1Q86U70 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.61■□□□□ 0.41
LDB1Q86U70 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.61■□□□□ 0.41
LDB1Q86U70 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.61■□□□□ 0.41
LDB1Q86U70 LINC01451-201ENST00000623792 534 ntBASIC17.61■□□□□ 0.41
LDB1Q86U70 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 OR6D1P-202ENST00000641007 5290 ntBASIC17.61■□□□□ 0.41
LDB1Q86U70 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.61■□□□□ 0.41
LDB1Q86U70 SIRPAP1-201ENST00000448467 1770 ntBASIC17.61■□□□□ 0.41
LDB1Q86U70 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.61■□□□□ 0.41
LDB1Q86U70 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LDB1Q86U70 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LDB1Q86U70 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.6■□□□□ 0.41
LDB1Q86U70 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
LDB1Q86U70 ARMC10P1-201ENST00000313754 855 ntBASIC17.6■□□□□ 0.41
LDB1Q86U70 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LDB1Q86U70 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 MIR1224-201ENST00000408193 85 ntBASIC17.6■□□□□ 0.41
LDB1Q86U70 CHCHD2P8-201ENST00000429873 447 ntBASIC17.6■□□□□ 0.41
LDB1Q86U70 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.6■□□□□ 0.41
LDB1Q86U70 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 AC011840.4-201ENST00000578471 627 ntBASIC17.6■□□□□ 0.41
LDB1Q86U70 AP005901.3-202ENST00000581653 237 ntBASIC17.6■□□□□ 0.41
LDB1Q86U70 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LDB1Q86U70 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.6■□□□□ 0.41
LDB1Q86U70 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LDB1Q86U70 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LDB1Q86U70 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LDB1Q86U70 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
LDB1Q86U70 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LDB1Q86U70 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LDB1Q86U70 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.59■□□□□ 0.41
LDB1Q86U70 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LDB1Q86U70 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.59■□□□□ 0.41
LDB1Q86U70 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LDB1Q86U70 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms