Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 PVRIG2P-201ENST00000435460 978 ntBASIC11.71□□□□□ -0.53
SCXQ7RTU7 LINC00265-3P-201ENST00000447588 903 ntBASIC11.71□□□□□ -0.53
SCXQ7RTU7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 AP003733.1-201ENST00000491725 852 ntBASIC11.71□□□□□ -0.53
SCXQ7RTU7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SCXQ7RTU7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SCXQ7RTU7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.54
SCXQ7RTU7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC11.71□□□□□ -0.54
SCXQ7RTU7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.71□□□□□ -0.54
SCXQ7RTU7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.54
SCXQ7RTU7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
SCXQ7RTU7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
SCXQ7RTU7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SCXQ7RTU7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 AP000867.3-201ENST00000524675 377 ntBASIC11.7□□□□□ -0.54
SCXQ7RTU7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 RN7SL510P-201ENST00000581311 263 ntBASIC11.7□□□□□ -0.54
SCXQ7RTU7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 FST-202ENST00000396947 2538 ntTSL 5 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC11.7□□□□□ -0.54
SCXQ7RTU7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SCXQ7RTU7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms