Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 REXO1L6P-202ENST00000619970 1078 ntBASIC16.94■□□□□ 0.3
RNF44Q7L0R7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF44Q7L0R7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 NOC2LP1-202ENST00000452600 2235 ntBASIC16.93■□□□□ 0.3
RNF44Q7L0R7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 RN7SL510P-201ENST00000581311 263 ntBASIC16.93■□□□□ 0.3
RNF44Q7L0R7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF44Q7L0R7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 AC004870.1-201ENST00000315132 882 ntBASIC16.92■□□□□ 0.3
RNF44Q7L0R7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 SAPCD2P3-201ENST00000455031 850 ntBASIC16.92■□□□□ 0.3
RNF44Q7L0R7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF44Q7L0R7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF44Q7L0R7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms