Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC018695.7-201ENST00000624587 2492 ntBASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 AC132938.6-201ENST00000623828 1655 ntBASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTCHD4Q6ZW05 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 AC009947.2-201ENST00000444014 672 ntBASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 SEC1P-202ENST00000473944 940 ntBASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 UBALD1-205ENST00000590891 2641 ntBASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTCHD4Q6ZW05 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTCHD4Q6ZW05 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms