Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 REXO1L11P-201ENST00000620964 1927 ntBASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 MYCLP1-201ENST00000372451 1075 ntBASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 KLF4P1-201ENST00000412782 1185 ntBASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 AP001005.1-201ENST00000571755 1248 ntBASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 MTDHP4-201ENST00000600287 670 ntBASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDPD4Q6W3E5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 AL031284.1-201ENST00000419297 478 ntBASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 AC079776.4-201ENST00000511039 504 ntBASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 STK19B-204ENST00000512515 211 ntBASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 LINC01451-201ENST00000623792 534 ntBASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 AL022326.1-202ENST00000641533 845 ntBASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
GDPD4Q6W3E5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 RPS2P28-201ENST00000314255 741 ntBASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 HNRNPDP1-201ENST00000439535 754 ntBASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 PRYP5-201ENST00000451909 266 ntBASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 RNA5SP419-201ENST00000515908 135 ntBASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.66■□□□□ 0.42
GDPD4Q6W3E5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms