Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 AL353692.3-201ENST00000407031 1396 ntBASIC16.46■□□□□ 0.23
REEP3Q6NUK4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 LYSMD4-203ENST00000378904 2122 ntBASIC16.46■□□□□ 0.23
REEP3Q6NUK4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
REEP3Q6NUK4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
REEP3Q6NUK4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
REEP3Q6NUK4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 MTCL1P1-201ENST00000446207 792 ntBASIC16.45■□□□□ 0.22
REEP3Q6NUK4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 AC092597.1-201ENST00000487352 616 ntBASIC16.45■□□□□ 0.22
REEP3Q6NUK4 YBX1P2-201ENST00000489612 999 ntBASIC16.45■□□□□ 0.22
REEP3Q6NUK4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 AC139887.4-201ENST00000607877 719 ntBASIC16.45■□□□□ 0.22
REEP3Q6NUK4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
REEP3Q6NUK4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 MIR662-201ENST00000384847 95 ntBASIC16.44■□□□□ 0.22
REEP3Q6NUK4 AC113347.1-201ENST00000413321 391 ntBASIC16.44■□□□□ 0.22
REEP3Q6NUK4 AL137013.1-201ENST00000432946 1228 ntBASIC16.44■□□□□ 0.22
REEP3Q6NUK4 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.44■□□□□ 0.22
REEP3Q6NUK4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 GPR32P1-201ENST00000601788 811 ntBASIC16.44■□□□□ 0.22
REEP3Q6NUK4 AC005363.2-201ENST00000618631 242 ntBASIC16.44■□□□□ 0.22
REEP3Q6NUK4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 AC099398.1-201ENST00000567919 2776 ntBASIC16.44■□□□□ 0.22
REEP3Q6NUK4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 LINC01311-201ENST00000565162 1445 ntBASIC16.44■□□□□ 0.22
REEP3Q6NUK4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
REEP3Q6NUK4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms