Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 RPS2P55-201ENST00000397318 883 ntBASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 AC007663.1-201ENST00000438948 1240 ntBASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 AC107956.1-201ENST00000494359 873 ntBASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 AC116562.4-202ENST00000641738 218 ntBASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 LYSMD4-203ENST00000378904 2122 ntBASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC00242Q5T6M2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 MIR4651-201ENST00000582622 73 ntBASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 AC024243.1-201ENST00000609234 778 ntBASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 AC026471.5-201ENST00000615068 467 ntBASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC00242Q5T6M2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms