Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 DDX43P3-201ENST00000441064 443 ntBASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 AC011840.4-201ENST00000578471 627 ntBASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERC4Q5GLZ8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 AL590627.1-203ENST00000421194 1026 ntBASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 DRAXINP1-201ENST00000437611 948 ntBASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HERC4Q5GLZ8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 FOSL1P1-201ENST00000511041 816 ntBASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 AL353801.3-201ENST00000609898 542 ntBASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.7■□□□□ 0.74
HERC4Q5GLZ8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 MIR574-201ENST00000385209 96 ntBASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 AP000867.3-201ENST00000524675 377 ntBASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 TPSP2-201ENST00000561760 610 ntBASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 AC012615.1-201ENST00000565797 1299 ntBASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HERC4Q5GLZ8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms