Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.84■□□□□ 0.61
CTC1Q2NKJ3 AC099343.3-201ENST00000605834 2503 ntBASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CTC1Q2NKJ3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 AC092865.6-201ENST00000642101 219 ntBASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTC1Q2NKJ3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 AL035633.1-201ENST00000406139 838 ntBASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.82■□□□□ 0.6
CTC1Q2NKJ3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 MKNK2P1-201ENST00000437526 628 ntBASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 MYLKP1-201ENST00000509077 1580 ntBASIC18.81■□□□□ 0.6
CTC1Q2NKJ3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 ABALON-201ENST00000629058 1903 ntBASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 MIR770-201ENST00000390219 98 ntBASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 AC007967.3-201ENST00000434308 558 ntBASIC18.8■□□□□ 0.6
CTC1Q2NKJ3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms