Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 MIR451A-201ENST00000385059 72 ntBASIC0.74□□□□□ -2.298e-11■□□□□ 8.8
SRSF1Q07955 WSB1-211ENST00000582208 625 ntTSL 39.5□□□□□ -0.892e-8■□□□□ 8.8
SRSF1Q07955 ZNF444-202ENST00000586123 574 ntTSL 422.99■■□□□ 1.275e-7■□□□□ 8.8
SRSF1Q07955 ZNF444-203ENST00000587195 571 ntTSL 422.17■■□□□ 1.145e-7■□□□□ 8.8
SRSF1Q07955 ZNF444-208ENST00000588358 642 ntTSL 222.17■■□□□ 1.145e-7■□□□□ 8.8
SRSF1Q07955 ZNF444-205ENST00000587467 646 ntTSL 221.8■■□□□ 1.085e-7■□□□□ 8.8
SRSF1Q07955 ZNF444-209ENST00000591564 586 ntTSL 221.28■■□□□ 15e-7■□□□□ 8.8
SRSF1Q07955 ZNF444-212ENST00000593100 562 ntTSL 219.64■□□□□ 0.735e-7■□□□□ 8.8
SRSF1Q07955 ZNF444-207ENST00000588203 585 ntTSL 418.97■□□□□ 0.635e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.9■□□□□ 0.625e-7■□□□□ 8.8
SRSF1Q07955 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.595e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-206ENST00000467988 702 ntTSL 518.63■□□□□ 0.575e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-212ENST00000486170 474 ntTSL 218.63■□□□□ 0.575e-7■□□□□ 8.8
SRSF1Q07955 ZNF444-206ENST00000587664 568 ntTSL 317.63■□□□□ 0.415e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-202ENST00000371520 1606 ntTSL 1 (best)16.89■□□□□ 0.295e-7■□□□□ 8.8
SRSF1Q07955 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.255e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-220ENST00000498544 985 ntTSL 215.73■□□□□ 0.115e-7■□□□□ 8.8
SRSF1Q07955 CPSF1-205ENST00000531042 580 ntTSL 515.25■□□□□ 0.035e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-208ENST00000476477 1676 ntTSL 214.39□□□□□ -0.115e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-210ENST00000479593 766 ntTSL 514.22□□□□□ -0.135e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-215ENST00000487866 940 ntTSL 514.18□□□□□ -0.145e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.195e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-204ENST00000460612 2645 ntTSL 213.25□□□□□ -0.295e-7■□□□□ 8.8
SRSF1Q07955 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.315e-7■□□□□ 8.8
SRSF1Q07955 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.02□□□□□ -0.335e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC12.8□□□□□ -0.365e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-205ENST00000463923 663 ntTSL 312.79□□□□□ -0.365e-7■□□□□ 8.8
SRSF1Q07955 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.435e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-209ENST00000479183 2356 ntTSL 211.72□□□□□ -0.535e-7■□□□□ 8.8
SRSF1Q07955 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.585e-7■□□□□ 8.8
SRSF1Q07955 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.735e-7■□□□□ 8.8
SRSF1Q07955 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.775e-7■□□□□ 8.8
SRSF1Q07955 ECHDC2-224ENST00000543419 555 ntTSL 38.6□□□□□ -1.035e-7■□□□□ 8.8
SRSF1Q07955 SLC25A1-203ENST00000461267 804 ntTSL 322.83■■□□□ 1.251e-6■□□□□ 8.8
SRSF1Q07955 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.34■■□□□ 1.011e-6■□□□□ 8.8
SRSF1Q07955 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.821e-6■□□□□ 8.8
SRSF1Q07955 SLC25A1-205ENST00000470922 1598 ntTSL 220.12■□□□□ 0.811e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.08■□□□□ 0.811e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-212ENST00000471128 546 ntTSL 419.6■□□□□ 0.731e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-211ENST00000461419 559 ntTSL 518.83■□□□□ 0.61e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.54■□□□□ 0.561e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.21■□□□□ 0.511e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.511e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.85■□□□□ 0.451e-6■□□□□ 8.8
SRSF1Q07955 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.31■□□□□ 0.362e-6■□□□□ 8.8
SRSF1Q07955 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.21■□□□□ 0.352e-6■□□□□ 8.8
SRSF1Q07955 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.18■□□□□ 0.342e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.311e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.21e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.141e-6■□□□□ 8.8
SRSF1Q07955 DDX42-212ENST00000581135 589 ntTSL 415.14■□□□□ 0.011e-6■□□□□ 8.8
SRSF1Q07955 ANKHD1-207ENST00000421134 4814 ntTSL 515□□□□□ -0.012e-6■□□□□ 8.8
SRSF1Q07955 RUFY2-209ENST00000472394 1113 ntTSL 514.72□□□□□ -0.051e-6■□□□□ 8.8
SRSF1Q07955 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.5□□□□□ -0.091e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.13□□□□□ -0.151e-6■□□□□ 8.8
SRSF1Q07955 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.161e-6■□□□□ 8.8
SRSF1Q07955 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.312e-6■□□□□ 8.8
SRSF1Q07955 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.01□□□□□ -0.331e-6■□□□□ 8.8
SRSF1Q07955 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.97□□□□□ -0.332e-6■□□□□ 8.8
SRSF1Q07955 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.22□□□□□ -0.451e-6■□□□□ 8.8
SRSF1Q07955 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.89□□□□□ -0.511e-6■□□□□ 8.8
SRSF1Q07955 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.562e-6■□□□□ 8.8
SRSF1Q07955 RUFY2-208ENST00000466493 2110 ntTSL 1 (best)8.14□□□□□ -1.111e-6■□□□□ 8.8
SRSF1Q07955 RUFY2-213ENST00000602465 3863 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.121e-6■□□□□ 8.8
SRSF1Q07955 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.342e-8■□□□□ 8.8
SRSF1Q07955 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.562e-8■□□□□ 8.8
SRSF1Q07955 PRPF8-216ENST00000577001 3274 ntTSL 511.18□□□□□ -0.622e-8■□□□□ 8.8
SRSF1Q07955 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.652e-8■□□□□ 8.8
SRSF1Q07955 MAP4-206ENST00000423088 899 ntTSL 39.93□□□□□ -0.822e-8■□□□□ 8.8
SRSF1Q07955 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.082e-8■□□□□ 8.8
SRSF1Q07955 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.092e-8■□□□□ 8.8
SRSF1Q07955 LUC7L3-210ENST00000507200 510 ntTSL 44.95□□□□□ -1.623e-18■□□□□ 8.8
SRSF1Q07955 MAP4-214ENST00000482752 386 ntTSL 32.79□□□□□ -1.962e-8■□□□□ 8.8
SRSF1Q07955 GPR75-ASB3-202ENST00000459916 556 ntTSL 421.91■■□□□ 1.12e-6■□□□□ 8.8
SRSF1Q07955 GPR75-ASB3-203ENST00000498475 736 ntTSL 521.91■■□□□ 1.12e-6■□□□□ 8.8
SRSF1Q07955 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.752e-6■□□□□ 8.8
SRSF1Q07955 BCAR1-213ENST00000563323 558 ntTSL 319.37■□□□□ 0.695e-8■□□□□ 8.8
SRSF1Q07955 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.17□□□□□ -0.32e-6■□□□□ 8.8
SRSF1Q07955 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.5□□□□□ -0.415e-8■□□□□ 8.8
SRSF1Q07955 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.525e-8■□□□□ 8.8
SRSF1Q07955 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.535e-8■□□□□ 8.8
SRSF1Q07955 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.612e-6■□□□□ 8.8
SRSF1Q07955 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.655e-8■□□□□ 8.8
SRSF1Q07955 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC10.35□□□□□ -0.752e-6■□□□□ 8.8
SRSF1Q07955 ASB3-211ENST00000482829 1910 ntTSL 510.19□□□□□ -0.782e-6■□□□□ 8.8
SRSF1Q07955 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.845e-8■□□□□ 8.8
SRSF1Q07955 ASB3-212ENST00000489508 560 ntTSL 47.21□□□□□ -1.262e-6■□□□□ 8.8
SRSF1Q07955 ASB3-203ENST00000406053 2648 ntTSL 56.19□□□□□ -1.422e-6■□□□□ 8.8
SRSF1Q07955 ASB3-205ENST00000414369 527 ntTSL 55.72□□□□□ -1.492e-6■□□□□ 8.8
SRSF1Q07955 ASB3-209ENST00000482134 623 ntTSL 55.06□□□□□ -1.62e-6■□□□□ 8.8
SRSF1Q07955 ASB3-207ENST00000470916 581 ntTSL 54.32□□□□□ -1.722e-6■□□□□ 8.8
SRSF1Q07955 ASB3-208ENST00000480522 620 ntTSL 53.9□□□□□ -1.792e-6■□□□□ 8.8
SRSF1Q07955 ABCC6-205ENST00000576204 1914 ntTSL 513.74□□□□□ -0.212e-7■□□□□ 8.8
SRSF1Q07955 HIF1AN-203ENST00000526476 708 ntTSL 317.94■□□□□ 0.467e-7■□□□□ 8.8
SRSF1Q07955 HIF1AN-205ENST00000533589 1042 ntTSL 39.86□□□□□ -0.837e-7■□□□□ 8.8
SRSF1Q07955 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.637e-7■□□□□ 8.8
SRSF1Q07955 AP1G2-231ENST00000557189 678 ntTSL 215.49■□□□□ 0.071e-7■□□□□ 8.8
SRSF1Q07955 AP1G2-208ENST00000553756 656 ntTSL 312.66□□□□□ -0.381e-7■□□□□ 8.8
SRSF1Q07955 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.711e-8■□□□□ 8.8
SRSF1Q07955 GNL3-202ENST00000418458 2040 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.851e-8■□□□□ 8.8
Retrieved 100 of 14,836 protein–RNA pairs in 348.4 ms