Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEP78395 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEP78395 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 TSPY22P-201ENST00000427496 604 ntBASIC17.81■□□□□ 0.44
PRAMEP78395 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 GUSBP12-201ENST00000513727 720 ntBASIC17.81■□□□□ 0.44
PRAMEP78395 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.81■□□□□ 0.44
PRAMEP78395 AL136038.3-201ENST00000561909 1096 ntBASIC17.81■□□□□ 0.44
PRAMEP78395 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.81■□□□□ 0.44
PRAMEP78395 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PRAMEP78395 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEP78395 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.81■□□□□ 0.44
PRAMEP78395 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEP78395 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEP78395 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PRAMEP78395 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEP78395 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.8■□□□□ 0.44
PRAMEP78395 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEP78395 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEP78395 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEP78395 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
PRAMEP78395 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.8■□□□□ 0.44
PRAMEP78395 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
PRAMEP78395 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.8■□□□□ 0.44
PRAMEP78395 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.8■□□□□ 0.44
PRAMEP78395 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PRAMEP78395 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PRAMEP78395 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRAMEP78395 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PRAMEP78395 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.79■□□□□ 0.44
PRAMEP78395 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
PRAMEP78395 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEP78395 BX276092.7-203ENST00000637198 1536 ntBASIC17.79■□□□□ 0.44
PRAMEP78395 PRORSD1P-202ENST00000563365 2154 ntBASIC17.79■□□□□ 0.44
PRAMEP78395 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
PRAMEP78395 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.79■□□□□ 0.44
PRAMEP78395 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PRAMEP78395 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.79■□□□□ 0.44
PRAMEP78395 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 NTF6B-201ENST00000591913 560 ntBASIC17.79■□□□□ 0.44
PRAMEP78395 AC011498.5-201ENST00000592027 486 ntBASIC17.79■□□□□ 0.44
PRAMEP78395 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.79■□□□□ 0.44
PRAMEP78395 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.79■□□□□ 0.44
PRAMEP78395 AL121956.5-201ENST00000625261 221 ntBASIC17.79■□□□□ 0.44
PRAMEP78395 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEP78395 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 LINC00304-203ENST00000565008 1864 ntBASIC17.79■□□□□ 0.44
PRAMEP78395 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PRAMEP78395 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRAMEP78395 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.79■□□□□ 0.44
PRAMEP78395 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRAMEP78395 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PRAMEP78395 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms