Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GABREP78334 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABREP78334 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABREP78334 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABREP78334 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABREP78334 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABREP78334 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABREP78334 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GABREP78334 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABREP78334 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.71■□□□□ 0.27
GABREP78334 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GABREP78334 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.71■□□□□ 0.27
GABREP78334 AC148477.5-201ENST00000625164 1645 ntBASIC16.71■□□□□ 0.27
GABREP78334 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
GABREP78334 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABREP78334 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABREP78334 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABREP78334 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABREP78334 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.71■□□□□ 0.27
GABREP78334 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.71■□□□□ 0.27
GABREP78334 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.71■□□□□ 0.27
GABREP78334 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
GABREP78334 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.71■□□□□ 0.27
GABREP78334 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
GABREP78334 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.71■□□□□ 0.27
GABREP78334 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.71■□□□□ 0.27
GABREP78334 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABREP78334 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABREP78334 AL353593.2-201ENST00000602529 1483 ntBASIC16.71■□□□□ 0.27
GABREP78334 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GABREP78334 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GABREP78334 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GABREP78334 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
GABREP78334 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
GABREP78334 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
GABREP78334 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.26
GABREP78334 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GABREP78334 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 ANO7L1-203ENST00000602586 1720 ntBASIC16.7■□□□□ 0.26
GABREP78334 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GABREP78334 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GABREP78334 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.7■□□□□ 0.26
GABREP78334 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.7■□□□□ 0.26
GABREP78334 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.7■□□□□ 0.26
GABREP78334 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.7■□□□□ 0.26
GABREP78334 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
GABREP78334 MRPL20P1-201ENST00000400819 433 ntBASIC16.7■□□□□ 0.26
GABREP78334 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.7■□□□□ 0.26
GABREP78334 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.7■□□□□ 0.26
GABREP78334 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.7■□□□□ 0.26
GABREP78334 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.7■□□□□ 0.26
GABREP78334 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.7■□□□□ 0.26
GABREP78334 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 SIGLEC30P-201ENST00000455569 941 ntBASIC16.7■□□□□ 0.26
GABREP78334 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
GABREP78334 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.7■□□□□ 0.26
GABREP78334 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.7■□□□□ 0.26
GABREP78334 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.7■□□□□ 0.26
GABREP78334 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.7■□□□□ 0.26
GABREP78334 PDPK2P-202ENST00000562415 1191 ntBASIC16.7■□□□□ 0.26
GABREP78334 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.7■□□□□ 0.26
GABREP78334 AC027612.4-201ENST00000605371 583 ntBASIC16.7■□□□□ 0.26
GABREP78334 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 AC010654.1-201ENST00000615722 808 ntBASIC16.7■□□□□ 0.26
GABREP78334 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.7■□□□□ 0.26
GABREP78334 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.7■□□□□ 0.26
GABREP78334 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.7■□□□□ 0.26
GABREP78334 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GABREP78334 AC132938.5-201ENST00000624980 1813 ntBASIC16.7■□□□□ 0.26
GABREP78334 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GABREP78334 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GABREP78334 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GABREP78334 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
GABREP78334 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
GABREP78334 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.69■□□□□ 0.26
GABREP78334 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GABREP78334 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GABREP78334 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GABREP78334 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms