Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CLTCL1P53675 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC25.02■■□□□ 1.6
CLTCL1P53675 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC25.02■■□□□ 1.6
CLTCL1P53675 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLTCL1P53675 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC25.02■■□□□ 1.6
CLTCL1P53675 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC25.02■■□□□ 1.6
CLTCL1P53675 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC25.02■■□□□ 1.6
CLTCL1P53675 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLTCL1P53675 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
CLTCL1P53675 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLTCL1P53675 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CLTCL1P53675 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC25.02■■□□□ 1.6
CLTCL1P53675 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLTCL1P53675 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC25.02■■□□□ 1.6
CLTCL1P53675 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 CBR1-202ENST00000399191 838 ntTSL 3 BASIC25.01■■□□□ 1.59
CLTCL1P53675 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC25.01■■□□□ 1.59
CLTCL1P53675 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CLTCL1P53675 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC25.01■■□□□ 1.59
CLTCL1P53675 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC25.01■■□□□ 1.59
CLTCL1P53675 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC25.01■■□□□ 1.59
CLTCL1P53675 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC25.01■■□□□ 1.59
CLTCL1P53675 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC25.01■■□□□ 1.59
CLTCL1P53675 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CLTCL1P53675 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 PNMT-202ENST00000394246 821 ntTSL 2 BASIC25.01■■□□□ 1.59
CLTCL1P53675 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC25.01■■□□□ 1.59
CLTCL1P53675 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
CLTCL1P53675 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
CLTCL1P53675 AC023141.13-201ENST00000604991 943 ntBASIC25.01■■□□□ 1.59
CLTCL1P53675 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CLTCL1P53675 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC25■■□□□ 1.59
CLTCL1P53675 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLTCL1P53675 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC25■■□□□ 1.59
CLTCL1P53675 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLTCL1P53675 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLTCL1P53675 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25■■□□□ 1.59
CLTCL1P53675 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC25■■□□□ 1.59
CLTCL1P53675 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
CLTCL1P53675 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CLTCL1P53675 AL139400.1-201ENST00000366220 510 ntBASIC25■■□□□ 1.59
CLTCL1P53675 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC25■■□□□ 1.59
CLTCL1P53675 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC25■■□□□ 1.59
CLTCL1P53675 PON3-203ENST00000427422 894 ntTSL 3 BASIC25■■□□□ 1.59
CLTCL1P53675 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC25■■□□□ 1.59
CLTCL1P53675 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC24.99■■□□□ 1.59
CLTCL1P53675 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CLTCL1P53675 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CLTCL1P53675 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CLTCL1P53675 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC24.99■■□□□ 1.59
CLTCL1P53675 SNHG9-202ENST00000564014 471 ntBASIC24.99■■□□□ 1.59
CLTCL1P53675 IGHV3OR16-6-201ENST00000568775 360 ntBASIC24.99■■□□□ 1.59
CLTCL1P53675 AC022145.2-201ENST00000598203 171 ntBASIC24.99■■□□□ 1.59
CLTCL1P53675 AL513210.1-201ENST00000629608 234 ntBASIC24.99■■□□□ 1.59
CLTCL1P53675 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CLTCL1P53675 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CLTCL1P53675 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CLTCL1P53675 PI4KAP1-204ENST00000612579 1703 ntBASIC24.99■■□□□ 1.59
CLTCL1P53675 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CLTCL1P53675 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CLTCL1P53675 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLTCL1P53675 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLTCL1P53675 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC24.98■■□□□ 1.59
CLTCL1P53675 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CLTCL1P53675 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CLTCL1P53675 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC24.98■■□□□ 1.59
CLTCL1P53675 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC24.98■■□□□ 1.59
CLTCL1P53675 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC24.98■■□□□ 1.59
CLTCL1P53675 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
CLTCL1P53675 AL139327.4-201ENST00000612362 153 ntBASIC24.98■■□□□ 1.59
CLTCL1P53675 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC24.98■■□□□ 1.59
CLTCL1P53675 AC104581.1-202ENST00000635932 2618 ntBASIC24.98■■□□□ 1.59
CLTCL1P53675 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLTCL1P53675 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLTCL1P53675 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CLTCL1P53675 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLTCL1P53675 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC24.98■■□□□ 1.59
CLTCL1P53675 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC24.98■■□□□ 1.59
CLTCL1P53675 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CLTCL1P53675 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CLTCL1P53675 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC24.97■■□□□ 1.59
CLTCL1P53675 FALEC-201ENST00000416894 566 ntTSL 3 BASIC24.97■■□□□ 1.59
CLTCL1P53675 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLTCL1P53675 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC24.97■■□□□ 1.59
CLTCL1P53675 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLTCL1P53675 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC24.97■■□□□ 1.59
CLTCL1P53675 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC24.97■■□□□ 1.59
CLTCL1P53675 ORC5-208ENST00000626700 344 ntTSL 3 BASIC24.97■■□□□ 1.59
CLTCL1P53675 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC24.97■■□□□ 1.59
CLTCL1P53675 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CLTCL1P53675 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC24.97■■□□□ 1.59
CLTCL1P53675 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CLTCL1P53675 BICD1-207ENST00000551848 1962 ntBASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms