Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-5P52952 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NKX2-5P52952 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NKX2-5P52952 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NKX2-5P52952 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.02■□□□□ -0
NKX2-5P52952 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.02■□□□□ -0
NKX2-5P52952 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.02■□□□□ -0
NKX2-5P52952 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.02■□□□□ -0
NKX2-5P52952 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.02■□□□□ -0
NKX2-5P52952 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NKX2-5P52952 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.02■□□□□ -0
NKX2-5P52952 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.02■□□□□ -0
NKX2-5P52952 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
NKX2-5P52952 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.02■□□□□ -0
NKX2-5P52952 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.02■□□□□ -0
NKX2-5P52952 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.02■□□□□ -0
NKX2-5P52952 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.02■□□□□ -0
NKX2-5P52952 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
NKX2-5P52952 AC233992.3-201ENST00000607491 485 ntBASIC15.02■□□□□ -0
NKX2-5P52952 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NKX2-5P52952 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.02□□□□□ -0.01
NKX2-5P52952 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.02□□□□□ -0.01
NKX2-5P52952 HLA-J-201ENST00000462773 1622 ntBASIC15.02□□□□□ -0.01
NKX2-5P52952 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NKX2-5P52952 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NKX2-5P52952 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.02□□□□□ -0.01
NKX2-5P52952 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
NKX2-5P52952 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NKX2-5P52952 KRT8P32-201ENST00000512863 1461 ntBASIC15.01□□□□□ -0.01
NKX2-5P52952 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX2-5P52952 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX2-5P52952 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX2-5P52952 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
NKX2-5P52952 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.01□□□□□ -0.01
NKX2-5P52952 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.01□□□□□ -0.01
NKX2-5P52952 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.01□□□□□ -0.01
NKX2-5P52952 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX2-5P52952 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX2-5P52952 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
NKX2-5P52952 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-5P52952 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-5P52952 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-5P52952 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX2-5P52952 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-5P52952 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15□□□□□ -0.01
NKX2-5P52952 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-5P52952 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-5P52952 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-5P52952 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-5P52952 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-5P52952 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-5P52952 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-5P52952 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms