Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
MRE11P49959 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MRE11P49959 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRE11P49959 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.59■□□□□ 0.89
MRE11P49959 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MRE11P49959 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
MRE11P49959 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
MRE11P49959 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
MRE11P49959 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.59■□□□□ 0.89
MRE11P49959 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.59■□□□□ 0.89
MRE11P49959 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.59■□□□□ 0.89
MRE11P49959 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.59■□□□□ 0.89
MRE11P49959 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.59■□□□□ 0.89
MRE11P49959 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.59■□□□□ 0.89
MRE11P49959 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.59■□□□□ 0.89
MRE11P49959 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MRE11P49959 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
MRE11P49959 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MRE11P49959 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.59■□□□□ 0.89
MRE11P49959 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MRE11P49959 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
MRE11P49959 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRE11P49959 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRE11P49959 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRE11P49959 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
MRE11P49959 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.58■□□□□ 0.89
MRE11P49959 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MRE11P49959 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRE11P49959 AP000347.1-202ENST00000435868 847 ntBASIC20.58■□□□□ 0.89
MRE11P49959 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.58■□□□□ 0.89
MRE11P49959 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
MRE11P49959 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.58■□□□□ 0.89
MRE11P49959 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.58■□□□□ 0.89
MRE11P49959 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.58■□□□□ 0.89
MRE11P49959 AP000550.4-202ENST00000639755 178 ntBASIC20.58■□□□□ 0.89
MRE11P49959 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.58■□□□□ 0.89
MRE11P49959 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.58■□□□□ 0.89
MRE11P49959 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.58■□□□□ 0.88
MRE11P49959 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRE11P49959 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
MRE11P49959 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
MRE11P49959 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRE11P49959 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRE11P49959 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.58■□□□□ 0.88
MRE11P49959 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRE11P49959 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
MRE11P49959 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
MRE11P49959 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.57■□□□□ 0.88
MRE11P49959 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.57■□□□□ 0.88
MRE11P49959 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.57■□□□□ 0.88
MRE11P49959 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 CYP2D8P-201ENST00000433633 1490 ntBASIC20.57■□□□□ 0.88
MRE11P49959 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.57■□□□□ 0.88
MRE11P49959 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
MRE11P49959 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.57■□□□□ 0.88
MRE11P49959 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
MRE11P49959 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
MRE11P49959 LIN28AP1-201ENST00000429574 405 ntBASIC20.57■□□□□ 0.88
MRE11P49959 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.57■□□□□ 0.88
MRE11P49959 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.57■□□□□ 0.88
MRE11P49959 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 AF186192.3-201ENST00000583427 947 ntBASIC20.57■□□□□ 0.88
MRE11P49959 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
MRE11P49959 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.57■□□□□ 0.88
MRE11P49959 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MRE11P49959 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MRE11P49959 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
MRE11P49959 AC093010.1-201ENST00000473625 1624 ntBASIC20.56■□□□□ 0.88
MRE11P49959 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
MRE11P49959 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRE11P49959 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MRE11P49959 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
MRE11P49959 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.56■□□□□ 0.88
MRE11P49959 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRE11P49959 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRE11P49959 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRE11P49959 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms