Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK8P49336 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CDK8P49336 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK8P49336 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.63■□□□□ 0.89
CDK8P49336 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.63■□□□□ 0.89
CDK8P49336 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK8P49336 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.63■□□□□ 0.89
CDK8P49336 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.63■□□□□ 0.89
CDK8P49336 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.63■□□□□ 0.89
CDK8P49336 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK8P49336 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 AC006504.4-201ENST00000592118 1568 ntBASIC20.63■□□□□ 0.89
CDK8P49336 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK8P49336 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK8P49336 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK8P49336 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDK8P49336 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK8P49336 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 AC012317.2-201ENST00000623305 2251 ntBASIC20.62■□□□□ 0.89
CDK8P49336 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK8P49336 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK8P49336 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CDK8P49336 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.62■□□□□ 0.89
CDK8P49336 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK8P49336 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CDK8P49336 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDK8P49336 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDK8P49336 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK8P49336 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK8P49336 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK8P49336 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK8P49336 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK8P49336 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 MIR940-201ENST00000401276 94 ntBASIC20.61■□□□□ 0.89
CDK8P49336 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.61■□□□□ 0.89
CDK8P49336 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.61■□□□□ 0.89
CDK8P49336 AC136632.2-201ENST00000512891 861 ntBASIC20.61■□□□□ 0.89
CDK8P49336 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK8P49336 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK8P49336 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK8P49336 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CDK8P49336 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 AC023511.2-201ENST00000618803 211 ntBASIC20.61■□□□□ 0.89
CDK8P49336 MIR1199-201ENST00000621445 119 ntBASIC20.61■□□□□ 0.89
CDK8P49336 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK8P49336 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK8P49336 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK8P49336 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK8P49336 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK8P49336 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK8P49336 AL390961.4-201ENST00000623958 2535 ntBASIC20.61■□□□□ 0.89
CDK8P49336 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK8P49336 AC097637.2-201ENST00000624096 1997 ntBASIC20.61■□□□□ 0.89
CDK8P49336 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CDK8P49336 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK8P49336 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK8P49336 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK8P49336 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK8P49336 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDK8P49336 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK8P49336 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
CDK8P49336 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK8P49336 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK8P49336 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDK8P49336 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK8P49336 ELK2BP-201ENST00000415014 1224 ntBASIC20.6■□□□□ 0.89
CDK8P49336 SLC25A6P5-201ENST00000435663 894 ntBASIC20.6■□□□□ 0.89
CDK8P49336 AC009947.1-201ENST00000444350 727 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms