Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC9A3P48764 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC9A3P48764 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC9A3P48764 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC9A3P48764 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC9A3P48764 AC145285.6-201ENST00000604632 637 ntBASIC16.22■□□□□ 0.19
SLC9A3P48764 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC9A3P48764 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC9A3P48764 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC9A3P48764 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC9A3P48764 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC9A3P48764 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC9A3P48764 LINC00602-201ENST00000629776 2065 ntBASIC16.22■□□□□ 0.19
SLC9A3P48764 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC9A3P48764 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC9A3P48764 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC9A3P48764 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SLC9A3P48764 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC9A3P48764 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 KRT18P65-201ENST00000439811 1286 ntBASIC16.21■□□□□ 0.19
SLC9A3P48764 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC9A3P48764 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC9A3P48764 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC9A3P48764 AC024563.2-201ENST00000603282 481 ntBASIC16.21■□□□□ 0.19
SLC9A3P48764 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC9A3P48764 AL138966.2-201ENST00000621997 464 ntBASIC16.21■□□□□ 0.19
SLC9A3P48764 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
SLC9A3P48764 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC9A3P48764 CICP6-201ENST00000457191 2729 ntBASIC16.21■□□□□ 0.19
SLC9A3P48764 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC9A3P48764 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC9A3P48764 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC9A3P48764 AL138688.1-201ENST00000624851 1594 ntBASIC16.21■□□□□ 0.18
SLC9A3P48764 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC9A3P48764 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC9A3P48764 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC9A3P48764 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SLC9A3P48764 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC9A3P48764 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC9A3P48764 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC9A3P48764 GCSHP2-201ENST00000560971 527 ntBASIC16.2■□□□□ 0.18
SLC9A3P48764 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC9A3P48764 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC9A3P48764 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC9A3P48764 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SLC9A3P48764 AL031432.5-201ENST00000641059 760 ntBASIC16.2■□□□□ 0.18
SLC9A3P48764 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC9A3P48764 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC9A3P48764 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
SLC9A3P48764 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC9A3P48764 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC9A3P48764 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC9A3P48764 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms