Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC021087.4-201ENST00000563761 564 ntBASIC17.66■□□□□ 0.42
CSNK1DP48730 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1DP48730 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1DP48730 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1DP48730 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CSNK1DP48730 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CSNK1DP48730 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.66■□□□□ 0.42
CSNK1DP48730 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSNK1DP48730 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1DP48730 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1DP48730 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.65■□□□□ 0.42
CSNK1DP48730 AF186996.4-201ENST00000467186 377 ntBASIC17.65■□□□□ 0.42
CSNK1DP48730 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1DP48730 RNPS1P1-201ENST00000507437 918 ntBASIC17.65■□□□□ 0.42
CSNK1DP48730 AC073648.2-201ENST00000510116 352 ntBASIC17.65■□□□□ 0.42
CSNK1DP48730 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1DP48730 AL662844.1-201ENST00000546340 181 ntBASIC17.65■□□□□ 0.42
CSNK1DP48730 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1DP48730 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.65■□□□□ 0.42
CSNK1DP48730 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1DP48730 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1DP48730 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.65■□□□□ 0.42
CSNK1DP48730 MTDHP4-201ENST00000600287 670 ntBASIC17.65■□□□□ 0.42
CSNK1DP48730 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.65■□□□□ 0.42
CSNK1DP48730 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.65■□□□□ 0.42
CSNK1DP48730 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSNK1DP48730 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.64■□□□□ 0.42
CSNK1DP48730 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.64■□□□□ 0.42
CSNK1DP48730 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CSNK1DP48730 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1DP48730 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1DP48730 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1DP48730 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1DP48730 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.64■□□□□ 0.41
CSNK1DP48730 LYSMD4-203ENST00000378904 2122 ntBASIC17.64■□□□□ 0.41
CSNK1DP48730 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.64■□□□□ 0.41
CSNK1DP48730 AC018712.1-201ENST00000455767 687 ntBASIC17.64■□□□□ 0.41
CSNK1DP48730 BX005266.1-201ENST00000473402 457 ntBASIC17.64■□□□□ 0.41
CSNK1DP48730 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1DP48730 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CSNK1DP48730 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.64■□□□□ 0.41
CSNK1DP48730 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1DP48730 AC025062.2-201ENST00000605477 670 ntBASIC17.64■□□□□ 0.41
CSNK1DP48730 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1DP48730 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1DP48730 AL138688.1-201ENST00000624851 1594 ntBASIC17.64■□□□□ 0.41
CSNK1DP48730 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1DP48730 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CSNK1DP48730 AC148477.5-201ENST00000625164 1645 ntBASIC17.64■□□□□ 0.41
CSNK1DP48730 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.64■□□□□ 0.41
CSNK1DP48730 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1DP48730 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1DP48730 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.64■□□□□ 0.41
CSNK1DP48730 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1DP48730 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSNK1DP48730 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CSNK1DP48730 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1DP48730 AC046185.3-201ENST00000623228 1824 ntBASIC17.63■□□□□ 0.41
CSNK1DP48730 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CSNK1DP48730 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CSNK1DP48730 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1DP48730 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1DP48730 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1DP48730 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1DP48730 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1DP48730 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CSNK1DP48730 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1DP48730 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSNK1DP48730 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.63■□□□□ 0.41
CSNK1DP48730 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.63■□□□□ 0.41
CSNK1DP48730 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSNK1DP48730 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.63■□□□□ 0.41
CSNK1DP48730 FDX1P1-201ENST00000449115 551 ntBASIC17.63■□□□□ 0.41
CSNK1DP48730 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CSNK1DP48730 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.63■□□□□ 0.41
CSNK1DP48730 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.63■□□□□ 0.41
CSNK1DP48730 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.63■□□□□ 0.41
CSNK1DP48730 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms